The Eukaryote Linear Motif resource for Functional Sites in Proteins
 
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Functional site class: PKA Phosphorylation site
Functional site description: Motifs phosphorylated by a subset of AGC group kinases including PKA that all have similar sequence specificity.
ELMs: MOD_PKA_1 MOD_PKA_2
Description: The optimal phosphorylation site preference for PKA is RR.(ST) - Lysine in the basic sites may weaken the prefence. This site is also targeted by other basophilic kinases of the AGC group, including PKG and PKC isoforms. AGC group kinases do not tolerate Pro at position +1. Lys at the Arg positions may be allowed in some weaker sites. Some specificity determinants may be present at the less conserved non-basic sites.
Pattern: [RK][RK].([ST])[^P].. (Probability: 0.0023151)
Present in taxons: Eukaryota
Interaction Domain:

Pkinase (PF00069)
Protein kinase domain
(Stochiometry: 1 : 1)

o See 25 Instances for MOD_PKA_1


o Abstract

PKA belongs to the large set of related AGC kinases having a preference for phosphorylating basophilic sites. cAMP-dependent protein kinase A (PKA) is the major target for cAMP action in eukaryotic cells. The enzyme is allosterically activated by binding of cAMP to two regulatory ( R ) subunits which induces dissociation of two catalytic ( C ) subunits. The active kinase is then free to phosphorylate substrates on serine, or less commonly threonine residues in recognition motifs. The enzyme acts or a wide number of proteins involved in several biochemical processes. These include glucose metabolism (via activation and inactivation of glycogen phosphorylase b and glycogen synthase respectively), fatty acid synthesis (via acetyl-coA carboxylase), pyruvate oxidation (via pyruvate dehyrogenase complex).



This is therefore a vital signaling enzyme in a number of metabolic processes, affecting many cell functions by activating or inactivating substrate proteins in the presence of cAMP

o 6 selected references:

o 5 GO-Terms:

o 25 Instances for MOD_PKA_1
(click table headers for sorting)
SequenceStartEndSubsequence
Instance LogicPDB Organism
KAP2_BOVIN 93 99 IPGRFDRRVSVCAETYNPDE true positive --- Bos taurus (Cattle)
AIBP_MOUSE 40 46 IWWGTQRRGSETMAGAAVKY true positive --- Mus musculus (House mouse)
AICDA_HUMAN 24 30 VRWAKGRRETYLCYVVKRRD true positive --- Homo sapiens (Human)
AICDA_HUMAN 35 41 LCYVVKRRDSATSFSLDFGY true positive --- Homo sapiens (Human)
RARA_HUMAN 366 372 KVYVRKRRPSRPHMFPKMLM true positive --- Homo sapiens (Human)
HDAC8_HUMAN 36 42 SLAKIPKRASMVHSLIEAYA true positive --- Homo sapiens (Human)
PTBP1_HUMAN 13 19 DIAVGTKRGSDELFSTCVTN true positive --- Homo sapiens (Human)
RIMS1_RAT 410 416 SRARHERRHSDVALPHTEAA true positive --- Rattus norvegicus (Norway rat)
CSKP_RAT 721 727 VKLPAFKRKTLVLLGAHGVG true positive --- Rattus norvegicus (Norway rat)
NOXA1_HUMAN 169 175 ALDQVQRRGSLPPRQVPRGE true positive --- Homo sapiens (Human)
CTNB1_HUMAN 549 555 AHQDTQRRTSMGGTQQQFVE true positive --- Homo sapiens (Human)
CTNB1_HUMAN 672 678 KPQDYKKRLSVELTSSLFRT true positive --- Homo sapiens (Human)
LASP1_MOUSE 153 159 QDSSSYRRPTEQQQPQPHHI true positive --- Mus musculus (House mouse)
AT1A1_RAT 940 946 LVICKTRRNSVFQQGMKNKI true positive --- Rattus norvegicus (Norway rat)
STK11_MOUSE 428 434 PARKVCSSNKIRRLSACKQQ true positive --- Mus musculus (House mouse)
KPYK1_YEAST 19 25 VAGSDLRRTSIIGTIGPKTN true positive --- Saccharomyces cerevisiae (Baker"s yeast)
MCLN1_HUMAN 554 560 PTSGKFRRGSGSACSLLCCC true positive --- Homo sapiens (Human)
PTN5_MOUSE 157 163 PLPPEDRRQSVSRQPSFTYS true positive --- Mus musculus (House mouse)
PTN5_MOUSE 218 224 SMGLQERRGSNVSLTLDMCT true positive --- Mus musculus (House mouse)
SOX9_HUMAN 61 67 KGEPDLKKESEEDKFPVCIR true positive --- Homo sapiens (Human)
RGRF1_MOUSE 913 919 SNKEVFRRMSLANTGFSSDQ true positive --- Mus musculus (House mouse)
MERL_HUMAN 515 521 FKDTDMKRLSMEIEKEKVEY true positive --- Homo sapiens (Human)
MEF2D_MOUSE 118 124 LLEDKYRRASEELDGLFRRY true positive --- Mus musculus (House mouse)
NMDZ1_HUMAN 894 900 ASSFKRRRSSKDTSTGGGRG true positive --- Homo sapiens (Human)
NFAC1_HUMAN 266 272 ASPCNKRKYSLNGRQPPYSP true positive --- Homo sapiens (Human)

Please cite: ELM - the database of eukaryotic linear motifs (PMID:22110040)

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