TRG_ER_diLys_1
Accession: | |
---|---|
Functional site class: | di Lysine ER retrieving signal |
Functional site description: | Located at the C-terminus of ER type I membrane proteins (cytoplasmic in this topology), interacts with members of the coatomer (COPI). |
ELM Description: | ER retention and retrieving signal found at the C-terminus of type I ER membrane proteins (cytoplasmic in this topology). Di-Lysine signal is responsible for COPI-mediated retrieval from post-ER compartments. |
Pattern: | K.{0,1}K.{2,3}$ |
Pattern Probability: | 0.0000268 |
Present in taxon: | Eukaryota |
Interaction Domain: |
WD40 (PF00400)
WD domain, G-beta repeat
(Stochiometry: 1 : 1)
|
Abstract |
The di-Lysine motif is found in type I membrane proteins of the ER and interacts directly with COPI (gamma-COP), which then drives the recycling of type I membrane proteins to the ER. Experimental data suggest that di-Lysine results in an enrichment in the intermediate compartment and cis-Golgi, while KDEL (TRG_ER_KDEL_1) dictates residency in the ER. The di-Lysine motif has to be exposed from the membrane lipids in order to function: a minimum of 5 amino acid residues is probably required between the first charged residue of the cytoplasmic tail and the first Lysine of the motif. The di-lysine motif appears to be conserved across eukaryotes, and mutagenesis studies show remarkable conservation of the functional motif between yeast and human. Some substitutions of Lysine by Arginine are permitted. Although the di-Lysine motif is the minimum requirement for targeting, the sequences flanking the Lysines can influence retention efficiency. STERIC MASKING: the list of proteins that possess a di-Lysine motif contains several proteins known to be localized in their mature folded state at the cell surface. An example is the mouse T-cell receptor beta-chain or high affinity IgE receptor alpha-chain. An explanation was provided by the observation that the motif on the alpha-chain can be sterically masked by polypeptides from the gamma-chain of the receptor. As a result the di-Lysine motif became non functional after the alpha-chain correctly assemble with the gamma-chain thereby ensuring that only functional complexes exit the ER. |
-
Identification of a consensus motif for retention of transmembrane
proteins in the endoplasmic reticulum.
Jackson MR, Nilsson T, Peterson PA
EMBO J 1990 Oct; 9 (10), 3153-62
PMID: 2120038
-
Steric masking of a dilysine endoplasmic reticulum retention motif during
assembly of the human high affinity receptor for immunoglobulin E.
Letourneur F, Hennecke S, Demolliere C, Cosson P
J Cell Biol 1995 May; 129 (4), 971-8
PMID: 7744968
-
Coatomer is essential for retrieval of dilysine-tagged proteins to the
endoplasmic reticulum.
Letourneur F, Gaynor EC, Hennecke S, Demolliere C, Duden R, Emr SD, Riezman H, Cosson P
Cell 1994 Dec 30; 79 (7), 1199-207
PMID: 8001155
-
Retrieval of transmembrane proteins to the endoplasmic reticulum.
Jackson MR, Nilsson T, Peterson PA
J Cell Biol 1993 Apr; 121 (2), 317-33
PMID: 8468349
-
Protein targeting to endoplasmic reticulum by dilysine signals involves
direct retention in addition to retrieval.
Andersson H, Kappeler F, Hauri HP
J Biol Chem 1999 May 21; 274 (21), 15080-4
PMID: 10329713
-
The {alpha}- and {beta}'-COP WD40 domains mediate cargo-selective
interactions with distinct di-lysine motifs.
Eugster A, Frigerio G, Dale M, Duden R
Mol Biol Cell 2003 Dec 29; None
PMID: 14699056
17 GO-Terms:
14 Instances for TRG_ER_diLys_1
(click table headers for sorting; Notes column: =Number of Switches, =Number of Interactions)
(click table headers for sorting; Notes column: =Number of Switches, =Number of Interactions)
Please cite:
ELM-the Eukaryotic Linear Motif resource-2024 update.
(PMID:37962385)
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement