ELM related links

Conservation Scorer - The ELM Conservation Scorer assigns a score to each ELM which corresponds to this ELM's conservation throughout homologous sequences
Phospho.ELM - The Phospho.ELM database contains a collection of experimentally verified Serine, Threonine and Tyrosine sites in metazoan proteins

HPRD - The Human Protein Reference Database
PROSITE - Database of protein families and domains (includes patterns describing some functional sites)

big-PI - GPI Modification Site Prediction
ChloroP - Predicts the presence of chloroplast transit peptides
DeltaMass - Mass database of protein post translational modifications
iSPOT - Prediction of interaction with protein domains (SH3, PDZ, WW...)
Merops - Database of peptidases (also termed proteases, proteinases and proteolytic enzymes)
MITOPROT - Prediction of mitochondrial targeting sequences
NetNGlyc - Predicts N-Glycosylation sites in human proteins
NetOGlyc - Predictions of mucin type GalNAc O-glycosylation sites in mammalian proteins
NetPhos - Prediction of phosphorylation sites
NMT - prediction of N-terminal N-myristoylation of proteins
O-GlycBase - Database of O- and C-glycosylated proteins
PepCyber - Phosphopeptide-binding domain resource
PredictNLS - Prediction and analysis of nuclear localization signals
Predotar - A prediction service for identifying putative mitochondrial and plastid targeting sequences
PSORT - Predicts protein sorting signals and localization sites in amino acid sequences
RESID - Database of annotations and structures for protein modifications
Scansite - Searches for phosphorylation sites and motifs that bind to domains such as SH2, 14-3-3 or PDZ .
SignalP - Prediction of cleavage sites and signal peptide/non-signal peptide prediction
TargetP - Prediction of subcellular location
The Sulfinator - Predicts tyrosine sulfation sites in protein sequences
YinOYang - predictions for O-beta-GlcNAc attachment sites in eukaryotic protein sequences

3of5 - Search for n-of-m pattern type allowing for the definition of ambiguities in patterns
DILIMOT - Explore interaction data for linear motif candidates
eMOTIF - Motif discovery and searching
Glam2 - Motif finding software
PATTINPROT - Scan a protein database or sequence for a pattern
PepSite - structural method to predict peptide/protein binding
Pratt - Pattern discovery
ScanProsite - Scan a protein sequence for the occurrence of patterns or search protein databases with a user-entered pattern
SIRW - Combines the ability to search protein databases with keywords and a sequence motif
SLIMFinder - Explore interaction data for linear motif candidates
Swiss Shop - Service that allows you to automatically obtain (by email) new sequence entries by pattern matching.
Teiresias - Sequence pattern discovery

Blocks - Databsae of multiply aligned ungapped segments corresponding to the most highly conserved regions of proteins
DisEMBL - Predictors of protein disorder
DisPROT - IUP resource with native disorder DB, predictors and more
GlobPlot - Discover protein sequence disorder and globularity
InterPro - Provides an integrated view of the commonly used signature databases (domains and functional sites)
IUPRED - predict native disorder/IUP
Pfam - Protein families database of alignments and HMMs
PredictProtein - Structure prediction and sequence analysis
PRINTS - Protein fingerprints database
ProDom - Protein domain database (automatically generated)
RONN - predict native disorder/IUP
SMART - Protein domain prediction (HMMs) and annotation
SWISS-PROT - A curated protein sequence database
TMHMM - Prediction of transmembrane helices in proteins
TMpred - Prediction of transmembrane regions and orientation