| << LIG_EVH1_2 << | Menu | >> LIG_FAT_LD_1 >> |
| Functional site class: | EVH1 ligands |
| Functional site description: | Proline-rich sequences that bind to the signal transduction modules EVH1 |
|---|---|
| ELMs: | LIG_EVH1_1 LIG_EVH1_2 LIG_EVH1_3 |
| Description: | The EVH1_3 motif can be divided into two regions. The N-terminal part comprises two phenylalanines (in several cases substituted by tyrosine and tryptophan, respectively). It is followed by a polyproline region, as for all EVH1-binding motifs, which forms a polyproline helix upon binding. In EVH1_3 motifs, this region consists of a hydrophobic amino acid, two highly conserved prolines (separated by one position) and an acidic residue (substituted by an arginine in distinct species, eg. yeast). The polyproline region resembles the one of EVH1_1 motif as it also contains a hydrophobic residue followed by prolines, yet the conserved prolines occupy different positions. The motif is followed by another highly conserved region demonstrating a pattern [RK].YPS. However, it was not included in the ELM regular expression as its significance for EVH1-binding remains unclear. |
| Pattern: | [FY].[FW].....[LMVIF]P.P[DE] (Probability: 0.0000002) |
| Present in taxons: | Eukaryota |
| Interaction Domain: |
WH1 (PF00568) |
See 3 Instances for LIG_EVH1_3
|
| Enabled/vasodilator-stimulated phosphoprotein homology 1 (EVH1) domains are 115 residue protein-protein interaction modules which provide essential links for their host proteins to various signal transduction pathways. Many EVH1-containing proteins are associated closely with actin-based structures and are involved in re-organization of the actin cytoskeleton. EVH1 domains are also present in proteins enriched in neuronal tissue, thus implicating them as potential mediators of synaptic plasticity, linking them to memory formation and learning. EVH1 domains recognize and bind specific proline-rich sequences (PRSs). In general, a small (3-6 residue) core PRS in the target protein binds a 'recognition pocket' on the domain surface. Further affinity- and specificity-increasing interactions are then formed between additional domain epitopes and peptide 'core-flanking' residues. |
(click table headers for sorting)
| Sequence | Start | End | Subsequence | Instance Logic | PDB | Organism |
|---|---|---|---|---|---|---|
| WIPF3_RAT | 425 | 437 | ESKFTFHSMEDFPPPDEYKP | true positive | --- | Rattus norvegicus (Norway rat) |
| WIPF2_HUMAN | 400 | 412 | ESKYSFHPVEDFPAPEEYKH | true positive | --- | Homo sapiens (Human) |
| WIPF1_HUMAN | 454 | 466 | ESRFYFHPISDLPPPEPYVQ | true positive | 1MKE |
Homo sapiens (Human) |
