The Eukaryote Linear Motif resource for Functional Sites in Proteins
 
 << TRG_LysEnd_APsAcLL_3 <<  Menu  >> TRG_LysEnd_GGAAcLL_2 >> 
 
Functional site class: Endosome-Lysosome-Basolateral sorting signals
Functional site description: Sorting and internalisation signals directing type I transmembrane proteins from the cell surface or TGN to the lysosomal-endosomal compartment. Generally found near the C-terminus, they interact with adaptor protein complexes such as APs and GGAs.
ELMs: TRG_LysEnd_APsAcLL_1 TRG_LysEnd_APsAcLL_3 TRG_LysEnd_GGAAcLL_1 TRG_LysEnd_GGAAcLL_2
Description: Sorting signal located at the C-terminus of type I transmembrane proteins from the Trans Golgi Network (TGN) targeted to the lysosomal-endosomal compartment. It interacts with the VHS domain of GGAs adaptor proteins, allowing the incorporation of cargo receptors and their cargo into clathrin coated vesicles budding from the TGN. Phosphorylation of a Serine residue upstream of the motif by casein kinase 2 could regulate the recognition of the motif at the TGN. It has been demonstrated that for the cation dependent mannose 6-phosphate receptor, phosphorylation of this Ser enhances the binding of the signal to its recognition module, the VHS domain of GGAs, by creating an additional point of attcahment to it (PMID:12032548).
Pattern: D..LL.{1,2}$ (Probability: 0.0000010)
Present in taxons: Bos taurus Coelomata Gallus gallus Homo sapiens Mus musculus Rattus norvegicus Xenopus laevis
PDB Structure: 1JWG
PDB:1JWG
Interaction Domain:

VHS (PF00790)
VHS domain
(Stochiometry: 1 : 1)

o See 6 Instances for TRG_LysEnd_GGAAcLL_1


o Abstract

Lysosomes are acidic compartments within cells where lumenal hydrolases degrade endogenous and internalized macromolecules. Most soluble hydrolases transit by the Trans Golgi network (TGN) where they are sorted from secretory proteins before they are directed to the endosome and then the lysosomes. The sorting events at the TGN involve transmembrane receptors which are themselves bearing sorting determinants in their cytoplasmic tails.
The interaction of such sorting signals with adaptor proteins such as APs and GGAs is responsible for the targeting of the receptors (and therefore their cargo). The acidic di Leu signals are interacting with the VHS domains of the GGAs adaptor proteins which in turn can bind to clathrin, ARF factor (regulator of coat assembly at the TGN) and other adaptors interacting with AP-1 gamma subunit. GGAs act by recruiting the receptors into TGN-derived clathrin-coated vesicles for transport to endosomes. The juxtamembrane di Leucine signals interact with AP1, AP2, AP3 and probably AP4 in trafficking events such as endocytosis, targeting to lysosomes or specialed compartments like melanosomes.

o 5 selected references:

o 6 GO-Terms:

o 6 Instances for TRG_LysEnd_GGAAcLL_1
(click table headers for sorting)
SequenceStartEndSubsequence
Instance LogicPDB Organism
MPRI_HUMAN 2485 2491 VSSTKLVSFHDDSDEDLLHI true positive 1JWG
Homo sapiens (Human)
MPRD_HUMAN 271 277 VGDDQLGEESEERDDHLLPM true positive 1JUQ
Homo sapiens (Human)
LRP3_HUMAN 764 770 PPPPCSPMLEASDDEALLVC true positive --- Homo sapiens (Human)
SORT_HUMAN 826 831 TASHTNKSGYHDDSDEDLLE true positive --- Homo sapiens (Human)
MPRI_BOVIN 2493 2499 AAATPISTFHDDSDEDLLHV true positive 1LF8
Bos taurus (Cow)
MPRD_BOVIN 273 279 VGDDQLGEESEERDDHLLPM true positive --- Bos taurus (Cow)
Please cite: ELM - the database of eukaryotic linear motifs (PMID:22110040)
feedback@elm.eu.org