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| Functional site class: | Endosome-Lysosome-Basolateral sorting signals |
| Functional site description: | Sorting and internalisation signals directing type I transmembrane proteins from the cell surface or TGN to the lysosomal-endosomal compartment. Generally found near the C-terminus, they interact with adaptor protein complexes such as APs and GGAs. |
|---|---|
| ELMs: | TRG_LysEnd_APsAcLL_1 TRG_LysEnd_APsAcLL_3 TRG_LysEnd_GGAAcLL_1 TRG_LysEnd_GGAAcLL_2 |
| Description: | Sorting signal located at the C-terminus of type I transmembrane proteins from the Trans Golgi Network (TGN) targeted to the lysosomal-endosomal compartment. It interacts with the VHS domain of GGAs adaptor proteins, allowing the incorporation of cargo receptors and their cargo into clathrin coated vesicles budding from the TGN. Phosphorylation of a Serine residue upstream of the motif by casein kinase 2 could regulate the recognition of the motif at the TGN. It has been demonstrated that for the cation dependent mannose 6-phosphate receptor, phosphorylation of this Ser enhances the binding of the signal to its recognition module, the VHS domain of GGAs, by creating an additional point of attcahment to it (PMID:12032548). |
| Pattern: | D..LL.{1,2}$ (Probability: 0.0000010) |
| Present in taxons: | Bos taurus Coelomata Gallus gallus Homo sapiens Mus musculus Rattus norvegicus Xenopus laevis |
PDB Structure: 1JWG
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| Interaction Domain: |
VHS (PF00790) |
See 6 Instances for TRG_LysEnd_GGAAcLL_1
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| Lysosomes are acidic compartments within cells where lumenal hydrolases degrade endogenous and internalized macromolecules. Most soluble hydrolases transit by the Trans Golgi network (TGN) where they are sorted from secretory proteins before they are directed to the endosome and then the lysosomes. The sorting events at the TGN involve transmembrane receptors which are themselves bearing sorting determinants in their cytoplasmic tails. |
(click table headers for sorting)
| Sequence | Start | End | Subsequence | Instance Logic | PDB | Organism |
|---|---|---|---|---|---|---|
| MPRI_HUMAN | 2485 | 2491 | VSSTKLVSFHDDSDEDLLHI | true positive | 1JWG |
Homo sapiens (Human) |
| MPRD_HUMAN | 271 | 277 | VGDDQLGEESEERDDHLLPM | true positive | 1JUQ |
Homo sapiens (Human) |
| LRP3_HUMAN | 764 | 770 | PPPPCSPMLEASDDEALLVC | true positive | --- | Homo sapiens (Human) |
| SORT_HUMAN | 826 | 831 | TASHTNKSGYHDDSDEDLLE | true positive | --- | Homo sapiens (Human) |
| MPRI_BOVIN | 2493 | 2499 | AAATPISTFHDDSDEDLLHV | true positive | 1LF8 |
Bos taurus (Cow) |
| MPRD_BOVIN | 273 | 279 | VGDDQLGEESEERDDHLLPM | true positive | --- | Bos taurus (Cow) |

