<< LIG_BIR_III_3 << |
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| Functional site class: | IAP-binding motif (IBM) |
| Functional site description: | The IBM specifically binds to the conserved BIR (baculoviral IAP repeat) domain that is found in Inhibitor of Apoptosis Proteins (IAPs). The motif is located at the N-terminal regions of caspases and pro-apoptotic IAP-antagonising proteins. In non-apoptotic cells, caspase activity is suppressed by the binding of IAPs to activated caspases. Upon apoptotic stimuli, pro-apoptotic IAP-antagonising proteins compete with the caspases for binding to the IAP or mediate their proteolytic degradation which leads to apoptosis promotion. |
|---|---|
| ELMs: | LIG_BIR_II_1 LIG_BIR_III_1 LIG_BIR_III_2 LIG_BIR_III_3 LIG_BIR_III_4 |
| Description: | Similar to the human motifs, semi-conserved Glu/Gln and Trp residues are often found in the IBM binding groove of drosophila Type III BIR domains. Drosophila Type III BIR domains bind neo N-terminal motifs that are found in caspases. Due to caspase cleavage specificity the motif is predominantly found C-terminal of aspartate residues. IBMs selective for these BIR domains contain a conserved alanine residue in the first position followed by a variable position, a glycine in the third position and a variable last position (DA.G.). |
| Pattern: | DA.G. (Probability: 0.0002754) |
| Present in taxons: |
Arthropoda
Drosophila melanogaster
|
| Interaction Domain: |
|
See 2 Instances for LIG_BIR_III_4
|
| In multicellular organisms apoptosis has to be strictly regulated to maintain the equilibrium between cell proliferation and cell death. Dysregulation of apoptosis is linked to several diseases, especially cancer (Meier, 2007). Inhibitor of Apoptosis Proteins (IAPs) are involved in apoptosis regulation but also exhibit several other functions in immunity, signal transduction via TNF-receptors, mitosis regulation etc. |
(click table headers for sorting)
| Sequence | Start | End | Subsequence | Instance Logic | PDB | Organism |
|---|---|---|---|---|---|---|
ICE_DROME |
28 | 32 | EQPNDHTDALGSVGSGGAGS | true positive | --- |
Drosophila melanogaster
(Fruit fly)
|
CASP1_DROME |
33 | 37 | FIMADNTDAKGCTPESLVVG | true positive | --- |
Drosophila melanogaster
(Fruit fly)
|
Please cite: ELM - the database of eukaryotic linear motifs (PMID:
22110040)
ELM data can be downloaded and distributed for non-commercial use according to the ELM Software License Agreement





