| << LIG_AGCK_PIF_3 << | Menu | >> LIG_AP2alpha_2 >> |
| Functional site class: | AP2 alpha ligands |
| Functional site description: | Motifs responsible for the binding of accessory endocytic proteins to the alpha-subunit of adaptor protein AP-2 and their recruitment to the site of clathrin coated vesicle formation. |
|---|---|
| ELMs: | LIG_AP2alpha_1 LIG_AP2alpha_2 |
| Description: | The FxDxF motif is an alpha appendage binding sequence found in several regulatory and accessory proteins essential to clathrin coat assembly. It is involved in the binding of amphipysin, AP180 and synaptojanin170 to the alpha-subunit of AP-2. |
| Pattern: | F.D.F (Probability: 0.0000169) |
| Present in taxons: | Eukaryota Homo sapiens Mus musculus Rattus norvegicus Saccharomyces cerevisiae |
PDB Structure: 1KY7
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| Interaction Domain: |
Alpha_adaptin_C (PF02296) |
See 11 Instances for LIG_AP2alpha_1
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| Vesicular traffic in the endocytic and secretory pathway is mediated by vesicles that carry cargo proteins. Clathrin-coated vesicles are responsible for a large fraction of the vescicular traffic that reaches the endosomal compartment, originating from the plasma membrane or from the TGN (trans-Golgi network). The assembly of the clathrin-coated vesicles is mediated by proteic adaptors, monomeric as AP180 and CALM or multimeric complexes like AP (Adaptor Protein) complexes. AP complexes are heterotetrameric proteins that simultaneously interact with clathrin and endocytic proteins: for example, the beta-subunit of AP-2 complex binds to clathrin, the mu-subunit interacts with Y-based sorting signal present in the cytosolic tails of membrane receptors and the alpha-subunit of AP-2 binds regulatory/accessory proteins involved in the control of clathrin coated vesicle formation. |
(click table headers for sorting)
| Sequence | Start | End | Subsequence | Instance Logic | PDB | Organism |
|---|---|---|---|---|---|---|
| AMPH_HUMAN | 324 | 328 | QENIISFFEDNFVPEISVTT | true positive | 1KY7 |
Homo sapiens (Human) |
| Q9PTK7_XENLA | 434 | 438 | STAEVDLFGDAFAASPDEAT | true positive | --- | Xenopus laevis (African clawed frog) |
| AP180_MOUSE | 640 | 644 | SSGVIDLFGDAFGSGASETQ | true positive | --- | Mus musculus (House mouse) |
| AP180_MOUSE | 562 | 566 | APPALDIFGDLFDSAPEVAA | true positive | --- | Mus musculus (House mouse) |
| AP180_MOUSE | 436 | 440 | VTTEVDLFGDAFAASPGEAP | true positive | --- | Mus musculus (House mouse) |
| AP180_HUMAN | 642 | 646 | SSGVIDLFGDAFGSSASEPQ | true positive | --- | Homo sapiens (Human) |
| AP180_HUMAN | 564 | 568 | APPALDIFGDLFESTPEVAA | true positive | --- | Homo sapiens (Human) |
| AP180_HUMAN | 440 | 444 | VTAEVDLFGDAFAASPGEAP | true positive | --- | Homo sapiens (Human) |
| BIN1_HUMAN | 362 | 366 | QEQILSLFEDTFVPEISVTT | true positive | --- | Homo sapiens (Human) |
| AMPH_RAT | 324 | 328 | QENIINFFEDNFVPEINVTT | true positive | --- | Rattus norvegicus (Norway rat) |
| AMPH_CHICK | 324 | 328 | QENIINLFDDNFVPEINVTT | true positive | --- | Gallus gallus (Chicken) |

