<< LIG_BRCT_MDC1_1 << |
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| Functional site class: | CAP-Gly Domain Ligands |
| Functional site description: | CAP-Gly domains are central to the regulatory interactions at the plus ends of microtubules. They are found in a number of microtubule-interacting proteins with very diverse architectures. CAP-Gly domains harboring an intact GKNDG binding site motif recognise C-terminal EEY/F$ or WxxGCY$ C-terminal motifs of EB proteins, alpha-tubulin, CLIP-170 and SLAINs. In the case of alpha-tubulin, the terminal tyrosine residue is subject to a cycle of detyrosination-tyrosination. |
|---|---|
| ELMs: | LIG_CAP-Gly_1 LIG_CAP-Gly_2 |
| Description: | Short, acidic and aromatic carboxy terminal sequence found in a small group of microtubule-associated-proteins. The EEY/F$ motif is highly conserved and so far limited to a few known proteins, alpha-tubulin, EB proteins and CLIP170. The current regular expression is mainly modelled on the metazoan sequences. While there is the possibility that the motif has drifted in other lineages, it retrieves almost all alpha-tubulins in Swiss-Prot. It has a low but finite rate of false positives. |
| Pattern: | [ED].{0,2}[ED].{0,2}[EDQ].{0,1}[YF]$ (Probability: 0.0000040) |
| Present in taxons: |
Eukaryota
|
PDB Structure: 2E4H
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| Interaction Domain: |
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See 3 Instances for LIG_CAP-Gly_1
|
| The cytoskeleton-associated protein-glycine-rich domain (CAP-Gly; |
(click table headers for sorting)
| Sequence | Start | End | Subsequence | Instance Logic | PDB | Organism |
|---|---|---|---|---|---|---|
CLIP1_HUMAN |
1434 | 1438 | CEICEMFGHWATNCNDDETF | true positive | 2PZO |
Homo sapiens
(Human)
|
MARE1_HUMAN |
263 | 268 | TDEGFVIPDEGGPQEEQEEY | true positive | 1TXQ 2HKQ |
Homo sapiens
(Human)
|
TBA1A_HUMAN |
443 | 451 | YEEVGVDSVEGEGEEEGEEY | true positive | 2E4H |
Homo sapiens
(Human)
|
Please cite: ELM - the database of eukaryotic linear motifs (PMID:
22110040)
ELM data can be downloaded and distributed for non-commercial use according to the ELM Software License Agreement






