<< LIG_PDZ_Class_3 << |
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| Functional site class: | HEAT Domain Ligand |
| Functional site description: | Docking motif for PIKK kinases family found in DNA damage proteins Nbs1, ATRIP and XRCC5. |
|---|---|
| ELMs: | LIG_PIKK_1 |
| Description: | Study from Falck et al. ( 15758953) has shown that mutations of the aminoacids EE, DD and RY are sufficient to inhibit the interaction of human Nbs1 with ATM. The same study has shown that mutation of residues EE and DD of the motif in Ku80 inhibits interaction with DNA-PKcs.A study from You et al. ( 15964794) has shown that mutation of the residues DD in Pombe Nbs1 abolishes the interaction with Tel1 |
| Pattern: | [DEN][DEN].{2,3}[ILMVA][DEN][DEN]L (Probability: 0.0000313) |
| Present in taxons: |
Eukaryota
|
| Interaction Domain: |
|
See 4 Instances for LIG_PIKK_1
|
| DNA damage response pathways involve three major groups of evolutionarily conserved proteins that act together to translate the signal of damaged DNA into responses of cell cycle arrest and DNA repair. These groups comprise sensor proteins that recognize damaged DNA directly or indirectly, transducer proteins - typically PIKKs such as ATM, ATR and DNA-PKcs - that relay and amplify the damage signal, and effector proteins that control cell cycle progression, chromatin restructuring and DNA repair. |
(click table headers for sorting)
| Sequence | Start | End | Subsequence | Instance Logic | PDB | Organism |
|---|---|---|---|---|---|---|
NBN_HUMAN |
736 | 743 | QNQHAKEESLADDLFRYNPY | true positive | --- |
Homo sapiens
(Human)
|
ATRIP_HUMAN |
769 | 776 | PDVTDCEEAALDDLCAAETD | true positive | --- |
Homo sapiens
(Human)
|
Q6XV80_XENLA |
744 | 751 | QTQQVREESLAEDLFRYNPK | true positive | --- |
Xenopus laevis
(African clawed frog)
|
XRCC5_HUMAN |
720 | 728 | GDTAAVFEEGGDVDDLLDMI | true positive | --- |
Homo sapiens
(Human)
|
Please cite: ELM - the database of eukaryotic linear motifs (PMID:
22110040)
ELM data can be downloaded and distributed for non-commercial use according to the ELM Software License Agreement





