DOC_PIKK_1
Accession: | |
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Functional site class: | HEAT Domain Ligand |
Functional site description: | Docking motif for PIKK kinases family found in DNA damage proteins Nbs1, ATRIP and XRCC5. |
ELM Description: | A study from Falck,2005 has shown that mutations of the amino acids EE, DD and RY are sufficient to inhibit the interaction of human Nbs1 with ATM. The same study has shown that mutation of residues EE and DD of the motif in Ku80 inhibits interaction with DNA-PKcs. Another study from You,2005 has shown that mutation of the residues DD in fission yeast Nbs1 abolishes the interaction with Tel1. |
Pattern: | [DEN][DEN].{2,3}[ILMVA][DEN][DEN]L |
Pattern Probability: | 0.0000313 |
Present in taxon: | Eukaryota |
Interaction Domain: |
HEAT (PF02985)
HEAT repeat
(Stochiometry: 1 : 1)
|
Abstract |
DNA damage response pathways involve three major groups of evolutionarily conserved proteins that act together to translate the signal of damaged DNA into responses of cell cycle arrest and DNA repair. These groups comprise sensor proteins that recognize damaged DNA directly or indirectly, transducer proteins - typically PIKKs such as ATM, ATR and DNA-PKcs - that relay and amplify the damage signal, and effector proteins that control cell cycle progression, chromatin restructuring and DNA repair. Recruitment of DNA damage-associated PIKKs to DNA lesions is thought to be a principal step in their activation and in their function in checkpoint signalling and DNA repair. Although these PIKKs have an affinity for DNA, recruitment to DNA lesions is facilitated by specific partner proteins. For example, recruitment of ATR to single-stranded DNA (ssDNA) requires ATRIP and DNA-PKcs recruitment to DNA double-strand breaks (DSBs) is mediated by the Ku70-Ku80 heterodimer. |
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Conserved modes of recruitment of ATM, ATR and DNA-PKcs to sites of DNA
damage.
Falck J, Coates J, Jackson SP
Nature 2005 Mar 31; 434 (7033), 605-11
PMID: 15758953
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ATM activation and its recruitment to damaged DNA require binding to the C
terminus of Nbs1.
You Z, Chahwan C, Bailis J, Hunter T, Russell P
Mol Cell Biol 2005 Jul; 25 (13), 5363-79
PMID: 15964794
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Characterization of an NBS1 C-terminal peptide that can inhibit ataxia
telangiectasia mutated (ATM)-mediated DNA damage responses and enhance
radiosensitivity.
Cariveau MJ, Tang X, Cui XL, Xu B
Mol Pharmacol 2007 Aug; 72 (2), 320-6
PMID: 17507690
3 GO-Terms:
4 Instances for DOC_PIKK_1
(click table headers for sorting; Notes column: =Number of Switches, =Number of Interactions)
(click table headers for sorting; Notes column: =Number of Switches, =Number of Interactions)
Acc., Gene-, Name | Start | End | Subsequence | Logic | #Ev. | Organism | Notes |
---|---|---|---|---|---|---|---|
Q6XV80 nbn Q6XV80_XENLA |
744 | 751 | QTQQVREESLAEDLFRYNPK | TP | 2 | Xenopus laevis (African clawed frog) | |
P13010 XRCC5 XRCC5_HUMAN |
720 | 728 | GDTAAVFEEGGDVDDLLDMI | TP | 2 | Homo sapiens (Human) | |
Q8WXE1 ATRIP ATRIP_HUMAN |
769 | 776 | PDVTDCEEAALDDLCAAETD | TP | 1 | Homo sapiens (Human) | |
O60934 NBN NBN_HUMAN |
736 | 743 | QNQHAKEESLADDLFRYNPY | TP | 6 | Homo sapiens (Human) |
Please cite:
ELM-the Eukaryotic Linear Motif resource-2024 update.
(PMID:37962385)
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement