The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI003768 B7UM88 espF
B7UM88_ECO27
169 175 VSFKPTRQAPPPPTSGQASG TP --- Escherichia coli O127:H6 str. E2348/69 206

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:1088 phenotype-based detection assay Alto,2007 support certain InteractionDetection
experimental MI:0808 comigration in sds page in vitro Alto,2007 support certain InteractionDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Alto,2007 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Alto,2007 support certain FeatureDetection
experimental MI:0084 phage display Alto,2007 support certain InteractionDetection
experimental MI:0096 pull down in vivo/in vitro Alto,2007 support certain InteractionDetection
experimental MI:0018 two hybrid in vivo Alto,2007 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q9Y5X1) SNX9_HUMAN PF00018 (SH3_1)
SH3 domain
6 54 [mitab][xml]

o  Pathways

KEGG: The sequence B7UM88 is implicated in the following 1 Pathway: (color codes: This sequence=red, interacting sequence=orange)
Please cite: ELM-the Eukaryotic Linear Motif resource-2024 update. (PMID:37962385)

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