| Accession | Acc. Gene-, Name | Start | End | Subsequence | Logic | PDB | Organism | Length |
|---|---|---|---|---|---|---|---|---|
| ELMI004690 | Q00416 SEN1 SEN1_YEAST |
2055 | 2062 | NEDDDDEDDYTPSISDSSLM | TP |
6O3X |
Saccharomyces cerevisiae S288c | 2231 |
Instance evidence
| Evidence class | PSI-MI | Method | BioSource | PubMed | Logic | Reliability | Notes |
|---|---|---|---|---|---|---|---|
| experimental | MI:0019 | coimmunoprecipitation | in vivo/in vitro | Zhang,2019 | support | certain | InteractionDetection |
| experimental | MI:0101 | sequence based prediction | in silico | Zhang,2019 | support | certain | InteractionDetection |
| experimental | MI:0053 | fluorescence polarization spectroscopy | in vitro | Zhang,2019 | support | certain | InteractionDetection |
| experimental | MI:0074 | mutation analysis | in vivo/in vitro | Zhang,2019 | support | certain | FeatureDetection |
| experimental | MI:0091 | chromatography technology | in vitro | Zhang,2019 | support | certain | InteractionDetection |
| experimental | MI:0096 | pull down | in vivo/in vitro | Zhang,2019 | support | certain | InteractionDetection |
| experimental | MI:0114 | x-ray crystallography | in vitro | Zhang,2019 | support | certain | InteractionDetection FeatureDetection |
Interactions
| Uniprot Id | Domain family | Domain Start | Domain End | Affinity Min/Max (µMol) | Notes |
|---|---|---|---|---|---|
| (P53617) NRD1_YEAST | IPR006569
(CID domain)
The C-terminal domain (CTD) of the large subunit of RNA polymerase II is a platform for mRNA processing factors and links gene transcription to mRNA capping, splicing and polyadenylation. CTD reco... |
1 | 153 | 0.51/0.61 | [mitab][xml] |
Please cite:
ELM-the Eukaryotic Linear Motif resource-2024 update.
(PMID:37962385)
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement