The Eukaryotic Linear Motif resource for
Functional Sites in Proteins
LIG_LIR_Gen_1

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI004445 D0NBE6 PexRD54
RD54_PHYIT 		377 381 AEALQFFRKAKPLDFDWEIV TP 5L83  
Phytophthora infestans T30-4 381

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0429 necessary binding site Dagdas,2016 support certain
experimental MI:0074 mutation analysis in vivo/in vitro Dagdas,2016 support certain FeatureDetection
experimental MI:0065 isothermal titration calorimetry in vitro Dagdas,2016 support certain InteractionDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Dagdas,2016 support certain InteractionDetection
experimental MI:0016 circular dichroism in vitro Maqbool,2016 support certain InteractionDetection
experimental MI:0081 peptide array Maqbool,2016 support certain InteractionDetection
experimental MI:0114 x-ray crystallography in vitro Maqbool,2016 support certain InteractionDetection FeatureDetection
experimental MI:0074 mutation analysis in vivo/in vitro Maqbool,2016 support certain FeatureDetection
experimental MI:0107 surface plasmon resonance in vitro Maqbool,2016 support certain InteractionDetection FeatureDetection
experimental MI:0808 comigration in sds page in vitro Maqbool,2016 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(M1C146) ATG8C_SOLTU PF02991 (Atg8)
Autophagy protein Atg8 ubiquitin like 		14 117 0.383/0.383 [mitab][xml]
Please cite: ELM-the Eukaryotic Linear Motif resource-2024 update. (PMID:37962385)

ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
feedback@elm.eu.org