ELM - instance LIG_EF_ALG2_ABM_1 in sequence O94979 at position 870

Instance

Accession	Acc. Gene-, Name	Start	End	Subsequence	Logic	PDB	Organism	Length
ELMI002659	O94979 SEC31A SC31A_HUMAN	870	879	HTQVPPYPQPQPYQPAQPYP	TP	---	Homo sapiens (Human)	1220

Instance evidence

Evidence class	PSI-MI	Method	BioSource	PubMed	Logic	Reliability	Notes
experimental	MI:0047	far western blotting	in vitro	Shibata,2010	support	likely	InteractionDetection
experimental	MI:0019	coimmunoprecipitation	in vivo/in vitro	Shibata,2010	support	likely	InteractionDetection
experimental	MI:0074	mutation analysis	in vivo/in vitro	Shibata,2010	support	likely	FeatureDetection
experimental	MI:0096	pull down	in vivo/in vitro	Shibata,2008	support	likely	InteractionDetection
experimental	MI:0047	far western blotting	in vitro	Shibata,2007	support	likely	InteractionDetection
experimental	MI:0017	classical fluorescence spectroscopy	in vitro	Shibata,2007	support	likely	InteractionDetection
experimental	MI:0096	pull down	in vivo/in vitro	Shibata,2007	support	likely	InteractionDetection
experimental	MI:0019	coimmunoprecipitation	in vivo/in vitro	Yamasaki,2006	support	likely	InteractionDetection
experimental	MI:0074	mutation analysis	in vivo/in vitro	Yamasaki,2006	support	likely	FeatureDetection

Interactions

Uniprot Id	Domain family	Domain Start	Domain End	Notes
(O75340) PDCD6_HUMAN	SM00054 (EFh) EF-hand, calcium binding motif	27	55	[mitab][xml]
(O75340) PDCD6_HUMAN	SM00054 (EFh) EF-hand, calcium binding motif	64	92	[mitab][xml]
(O75340) PDCD6_HUMAN	SM00054 (EFh) EF-hand, calcium binding motif	94	122	[mitab][xml]
(O75340) PDCD6_HUMAN	SM00054 (EFh) EF-hand, calcium binding motif	130	158	[mitab][xml]
(O75340) PDCD6_HUMAN	SM00054 (EFh) EF-hand, calcium binding motif	160	190	[mitab][xml]

Pathways

KEGG: The sequence O94979 is implicated in the following 1 Pathway: (color codes: This sequence=red, interacting sequence=orange)

Please cite: ELM-the Eukaryotic Linear Motif resource-2024 update. (PMID:37962385)

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