Pathways linked from ELM instances
The following list contains those pathways annotated at the "Kyoto Encyclopedia of Genes and Genomes" (KEGG) database for which at least one sequence is stored in the ELM database (containing at least one ELM instance). Sequences have been mapped from Uniprot to KEGG and colored in the pathway according to a simple colorscheme.
| Taxon | Pathway entry | Pathway name | # Instances | # Sequences |
|---|---|---|---|---|
| sce04111 | Cell cycle yeast | 27 | 16 | |
| sce00310 | Lysine degradation | 1 | 1 | |
| sce04011 | MAPK signaling pathway yeast | 11 | 6 | |
| sce04113 | Meiosis yeast | 19 | 14 | |
| sce03420 | Nucleotide excision repair | 6 | 6 | |
| sce04146 | Peroxisome | 3 | 2 | |
| sce04140 | Regulation of autophagy | 1 | 1 | |
| sce03018 | RNA degradation | 5 | 4 | |
| sce03013 | RNA transport | 3 | 3 | |
| sce04120 | Ubiquitin mediated proteolysis | 6 | 2 |
Links redirect to the KEGG database with a color overlay corresponding to ELM classes.
Coloring is as follows:
CLV (cleavage site)
DOC (docking site)
DEG (degradation motif)
LIG (ligand binding motif)
MOD (modification site)
TRG (targeting motif)
multiple classes per sequence
Coloring is as follows:
CLV (cleavage site)
DOC (docking site)
DEG (degradation motif)
LIG (ligand binding motif)
MOD (modification site)
TRG (targeting motif)
multiple classes per sequence
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement