Pathways linked from ELM instances
The following list contains those pathways annotated at the "Kyoto Encyclopedia of Genes and Genomes" (KEGG) database for which at least one sequence is stored in the ELM database (containing at least one ELM instance). Sequences have been mapped from Uniprot to KEGG and colored in the pathway according to a simple colorscheme.
| Taxon | Pathway entry | Pathway name | # Instances | # Sequences |
|---|---|---|---|---|
| gga04520 | Adherens junction | 2 | 2 | |
| gga04210 | Apoptosis | 3 | 1 | |
| gga04625 | C type lectin receptor signaling pathway | 4 | 2 | |
| gga04144 | Endocytosis | 2 | 2 | |
| gga04012 | ErbB signaling pathway | 4 | 2 | |
| gga04510 | Focal adhesion | 11 | 7 | |
| gga04540 | Gap junction | 1 | 1 | |
| gga04912 | GnRH signaling pathway | 4 | 2 | |
| gga05168 | Herpes simplex virus 1 infection | 1 | 1 | |
| gga04010 | MAPK signaling pathway | 4 | 2 | |
| gga04137 | Mitophagy animal | 4 | 2 | |
| gga04150 | mTOR signaling pathway | 1 | 1 | |
| gga04621 | NOD like receptor signaling pathway | 3 | 1 | |
| gga04114 | Oocyte meiosis | 1 | 1 | |
| gga04914 | Progesterone mediated oocyte maturation | 1 | 1 | |
| gga04810 | Regulation of actin cytoskeleton | 6 | 4 | |
| gga05132 | Salmonella infection | 3 | 1 | |
| gga04530 | Tight junction | 4 | 2 | |
| gga04620 | Toll like receptor signaling pathway | 3 | 1 | |
| gga04270 | Vascular smooth muscle contraction | 2 | 1 | |
| gga04370 | VEGF signaling pathway | 3 | 2 | |
| gga04310 | Wnt signaling pathway | 4 | 2 |
Links redirect to the KEGG database with a color overlay corresponding to ELM classes.
Coloring is as follows:
CLV (cleavage site)
DOC (docking site)
DEG (degradation motif)
LIG (ligand binding motif)
MOD (modification site)
TRG (targeting motif)
multiple classes per sequence
Coloring is as follows:
CLV (cleavage site)
DOC (docking site)
DEG (degradation motif)
LIG (ligand binding motif)
MOD (modification site)
TRG (targeting motif)
multiple classes per sequence
Please cite:
The Eukaryotic Linear Motif resource: 2022 release.
(PMID:34718738)
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement