The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI001591 P55284 Cdh5
CADH5_MOUSE
779 784 PRFKMLAELYGSDPQEELII TP 2KOH  
pdb:2KOH
Mus musculus (House mouse) 784

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0074 mutation analysis in vivo/in vitro Tyler,2010 support certain FeatureDetection
experimental MI:0053 fluorescence polarization spectroscopy in vitro Tyler,2010 support certain InteractionDetection
experimental MI:0077 nuclear magnetic resonance in vitro Tyler,2010 support certain InteractionDetection FeatureDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q99NH2) PARD3_MOUSE PF00595 (PDZ)
PDZ domain (Also known as DHR or GLGF)
4.0/8.0 [mitab][xml]

o  Pathways

KEGG: The sequence P55284 is implicated in the following 2 Pathways: (color codes: This sequence=red, interacting sequence=orange)
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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