The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002037 Q9QUH6 Syngap1
SYGP1_RAT
1303 1308 KRLLDAQRGSFPPWVQQTRV TP --- Rattus norvegicus (Norway rat) 1308

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0096 pull down in vivo/in vitro support certain InteractionDetection
experimental MI:0519 glutathione s tranferase tag in vitro Kim,1998 support certain
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Kim,1998 support certain InteractionDetection
experimental MI:0405 competition binding in vitro Kim,1998 support certain InteractionDetection
experimental MI:0018 two hybrid in vivo Kim,1998 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q62936) DLG3_RAT PF00595 (PDZ)
PDZ domain (Also known as DHR or GLGF)
[mitab][xml]
(P31016) DLG4_RAT PF00595 (PDZ)
PDZ domain (Also known as DHR or GLGF)
[mitab][xml]
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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