The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002583 O55207-3 Synj2
SYNJ2_RAT
1288 1293 FVRTVAAQRLTPVDASGSSV TP --- Rattus norvegicus (Norway rat) 1293

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0096 pull down in vivo/in vitro support certain InteractionDetection
experimental MI:0519 glutathione s tranferase tag in vitro Nemoto,1999 support certain
experimental MI:0411 elisa in vitro Nemoto,1999 support certain InteractionDetection ParticipantIdentification
experimental MI:0004 affinity chromatography technology in vivo/in vitro Nemoto,1999 support certain InteractionDetection
experimental MI:0047 far western blotting in vitro Nemoto,1999 support certain InteractionDetection
experimental MI:0018 two hybrid in vivo Nemoto,1999 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Nemoto,1999 support certain FeatureDetection
experimental MI:0018 two hybrid in vivo Nemoto,2001 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Nemoto,2001 support certain FeatureDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q9WVJ4) SYJ2B_RAT PF00595 (PDZ)
PDZ domain (Also known as DHR or GLGF)
13 97 [mitab][xml]

o  Switches



This ELM instance is part of the following 1 switching mechanism annotated at the switches.ELM resource:
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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