The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002343 O00560 SDCBP
SDCB1_HUMAN
3 7 MSLYPSLEDLKVDKVIQAQT TP --- Homo sapiens (Human) 298

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0107 surface plasmon resonance in vitro Baietti,2012 support certain InteractionDetection FeatureDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Baietti,2012 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Baietti,2012 support certain FeatureDetection
experimental MI:0018 two hybrid in vivo Baietti,2012 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q8WUM4) PDC6I_HUMAN PF13949 (ALIX_LYPXL_bnd)
ALIX V-shaped domain binding to HIV
412 701 [mitab][xml]
(Q9WU78) PDC6I_MOUSE PF13949 (ALIX_LYPXL_bnd)
ALIX V-shaped domain binding to HIV
412 701 [mitab][xml]
Please cite: ELM — the eukaryotic linear motif resource in 2020. (PMID:31680160)

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