The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI004142 P35962 gag
GAG_HV1Y2
483 492 PIDKELYPLASLRSLFGSDP TP 2R05  
Human immunodeficiency virus type 1 (isolate YU2) 500

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0107 surface plasmon resonance in vitro Zhai,2008 support certain InteractionDetection FeatureDetection
experimental MI:0114 x-ray crystallography in vitro Zhai,2008 support certain InteractionDetection FeatureDetection
experimental MI:0114 x-ray crystallography in vitro Fisher,2007 support certain InteractionDetection FeatureDetection
experimental MI:0506 over expressed level in vivo Fisher,2007 support certain
experimental MI:0113 western blot in vitro Fisher,2007 support certain ParticipantIdentification FeatureDetection
experimental MI:0074 mutation analysis in vivo/in vitro Fisher,2007 support certain FeatureDetection
experimental MI:0968 biosensor Fisher,2007 support certain InteractionDetection
experimental MI:0114 x-ray crystallography in vitro Lee,2007 support certain InteractionDetection FeatureDetection
experimental MI:0065 isothermal titration calorimetry in vitro Lee,2007 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q8WUM4) PDC6I_HUMAN PF13949 (ALIX_LYPXL_bnd)
ALIX V-shaped domain binding to HIV
412 701 2.0/8.0 [mitab][xml]
Please cite: ELM — the eukaryotic linear motif resource in 2020. (PMID:31680160)

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