The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI001475 P03347 gag
GAG_HV1B1
495 504 PIDKELYPLTSLRSLFGNDP TP 2R02  
pdb:2R02
Human immunodeficiency virus type 1 BH10 512

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0107 surface plasmon resonance in vitro Fisher,2007 support certain InteractionDetection FeatureDetection
experimental MI:0018 two hybrid in vivo Martin-Serrano,2003 support certain InteractionDetection
experimental MI:0059 gst pull down in vivo/in vitro Strack,2003 support certain InteractionDetection
experimental MI:0065 isothermal titration calorimetry in vitro Lee,2007 support certain InteractionDetection
experimental MI:0107 surface plasmon resonance in vitro Zhai,2008 support certain InteractionDetection FeatureDetection
experimental MI:0114 x-ray crystallography in vitro Zhai,2008 support certain InteractionDetection FeatureDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q8WUM4) PDC6I_HUMAN PF13949 (ALIX_LYPXL_bnd)
ALIX V-shaped domain binding to HIV
408 702 [mitab][xml]
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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