The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI004055 O43623 SNAI2
SNAI2_HUMAN
1 10 MPRSFLVKKHFNASKKPNYS TP --- Homo sapiens (Human) 268

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0405 competition binding in vitro Ferrari-Amorotti,2013 support certain InteractionDetection
experimental MI:1220 tag visualisation by luciferase assay Ferrari-Amorotti,2013 support certain ParticipantIdentification
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Ferrari-Amorotti,2013 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(O60341) KDM1A_HUMAN PF01593 (Amino_oxidase)
Flavin containing amine oxidoreductase
288 826 [mitab][xml]

o  Pathways

KEGG: The sequence O43623 is implicated in the following 2 Pathways: (color codes: This sequence=red, interacting sequence=orange)
Please cite: ELM — the eukaryotic linear motif resource in 2020. (PMID:31680160)

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