The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002914 Q5XXP4 Non-structural polyprotein
POLN_CHIK3
1828 1833 ESLSSELLTFGDFSPGEVDD TP --- Chikungunya virus strain Senegal 37997 2473

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0416 fluorescence microscopy Fros,2015 support certain InteractionDetection
experimental MI:0367 green fluorescent protein tag in vivo Fros,2015 support certain
experimental MI:0074 mutation analysis in vivo/in vitro Fros,2015 support certain FeatureDetection
experimental MI:0416 fluorescence microscopy Fros,2012 support certain InteractionDetection
experimental MI:0367 green fluorescent protein tag in vivo Fros,2012 support certain
experimental MI:0074 mutation analysis in vivo/in vitro Fros,2012 support certain FeatureDetection
experimental MI:0007 anti tag coimmunoprecipitation in vivo Panas,2014 support certain InteractionDetection
experimental MI:0367 green fluorescent protein tag in vivo Panas,2014 support certain
experimental MI:0663 confocal microscopy in vivo/in vitro Panas,2014 support certain InteractionDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Panas,2014 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Panas,2014 support certain FeatureDetection
predicted MI:2163 by homology in silico Panas,2015 support likely ParticipantIdentification

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(Q13283) G3BP1_HUMAN PF02136 (NTF2)
Nuclear transport factor 2 (NTF2) domain
11 133 [mitab][xml]
(Q9UN86) G3BP2_HUMAN PF02136 (NTF2)
Nuclear transport factor 2 (NTF2) domain
11 133 [mitab][xml]
(Q9VFT4) Q9VFT4_DROME PF02136 (NTF2)
Nuclear transport factor 2 (NTF2) domain
16 129 [mitab][xml]
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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