The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002660 O94979 SEC31A
SC31A_HUMAN
839 843 YPHGENPPPPGFIMHGNVNP TP --- Homo sapiens (Human) 1220

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0047 far western blotting in vitro Shibata,2010 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Shibata,2010 support certain FeatureDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
27 55 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
64 92 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
94 122 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
130 158 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
160 190 [mitab][xml]

o  Pathways

KEGG: The sequence O94979 is implicated in the following 1 Pathway: (color codes: This sequence=red, interacting sequence=orange)
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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