The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002652 Q99816 TSG101
TS101_HUMAN
189 197 GYPGCPYPPGGPYPATTSSQ TP --- Homo sapiens (Human) 390

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0096 pull down in vivo/in vitro support certain InteractionDetection
experimental MI:0519 glutathione s tranferase tag in vitro Katoh,2005 support certain
experimental MI:0047 far western blotting in vitro Katoh,2005 support certain InteractionDetection
experimental MI:0007 anti tag coimmunoprecipitation in vivo Katoh,2005 support certain InteractionDetection
experimental MI:0018 two hybrid in vivo Katoh,2005 support certain InteractionDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Katoh,2005 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Katoh,2005 support certain FeatureDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Okumura,2013 support certain InteractionDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
27 55 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
64 92 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
94 122 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
130 158 [mitab][xml]
(O75340) PDCD6_HUMAN SM00054 (EFh)
EF-hand, calcium binding motif
160 190 [mitab][xml]

o  Pathways

KEGG: The sequence Q99816 is implicated in the following 1 Pathway: (color codes: This sequence=red, interacting sequence=orange) Reactome: The sequence Q99816 is implicated in the following 1 Pathway:
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
feedback@elm.eu.org