The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002348 P03135 Capsid protein VP1
CAPSD_AAV2S
511 513 TGATKYHLNGRDSLVNPGPA TP --- Adeno-associated virus 2 Srivastava/1982 735

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0047 far western blotting in vitro Summerford,1999 support certain InteractionDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Summerford,1999 support certain InteractionDetection
experimental MI:0113 western blot in vitro Summerford,1999 support certain ParticipantIdentification FeatureDetection
experimental MI:0573 mutation disrupting interaction in vivo/in vitro Asokan,2006 support certain
experimental MI:0405 competition binding in vitro Asokan,2006 support certain InteractionDetection
experimental MI:0074 mutation analysis in vivo/in vitro Asokan,2006 support certain FeatureDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(P08648) ITA5_HUMAN PF08441 (Integrin_alpha2)
Integrin alpha
489 921 [mitab][xml]
(P08648) ITA5_HUMAN PF01839 (FG-GAP)
FG-GAP repeat
[mitab][xml]
(P06756) ITAV_HUMAN PF08441 (Integrin_alpha2)
Integrin alpha
467 914 [mitab][xml]
(P06756) ITAV_HUMAN PF01839 (FG-GAP)
FG-GAP repeat
[mitab][xml]
(P05556) ITB1_HUMAN PF00362 (Integrin_beta)
Integrin, beta chain
34 464 [mitab][xml]
(P18084) ITB5_HUMAN PF00362 (Integrin_beta)
Integrin, beta chain
35 463 [mitab][xml]
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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