The Eukaryotic Linear Motif resource for
Functional Sites in Proteins

o  Instance

Accession Acc. Gene-, NameStartEndSubsequenceLogic PDB OrganismLength
ELMI002849 P53632 PAP2
PAP2_YEAST
574 583 TYITVSSEDDDEDGYNPYTL TP 2MOW  
Saccharomyces cerevisiae S288c 584

o  Instance evidence

Evidence classPSI-MIMethodBioSourcePubMedLogicReliabilityNotes
experimental MI:0929 northern blot Tudek,2014 support certain ParticipantIdentification
experimental MI:0051 fluorescence technology Tudek,2014 support certain InteractionDetection
experimental MI:0402 chromatin immunoprecipitation assay in vivo Tudek,2014 support certain InteractionDetection
experimental MI:0019 coimmunoprecipitation in vivo/in vitro Tudek,2014 support certain InteractionDetection
experimental MI:0113 western blot in vitro Tudek,2014 support certain ParticipantIdentification FeatureDetection
experimental MI:0077 nuclear magnetic resonance in vitro Tudek,2014 support certain InteractionDetection FeatureDetection

o  Interactions

Uniprot Id Domain family Domain Start Domain End Affinity Min/Max (µMol) Notes
(P53617) NRD1_YEAST IPR006569 (CID domain)
The C-terminal domain (CTD) of the large subunit of RNA polymerase II is a platform for mRNA processing factors and links gene transcription to mRNA capping, splicing and polyadenylation. CTD reco...
1 153 1.08/1.1 [mitab][xml]

o  Pathways

KEGG: The sequence P53632 is implicated in the following 1 Pathway: (color codes: This sequence=red, interacting sequence=orange)
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)

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