TRG_LysEnd_APsAcLL_3
| Accession: | |
|---|---|
| Functional site class: | Endosome-Lysosome-Basolateral sorting signals |
| Functional site description: | Sorting and internalisation signals directing type I transmembrane proteins from the cell surface or TGN to the lysosomal-endosomal compartment. Generally found near the C-terminus, they interact with adaptor protein complexes such as APs and GGAs. |
| ELMs with same func. site: | TRG_LysEnd_APsAcLL_1 TRG_LysEnd_APsAcLL_3 TRG_LysEnd_GGAAcLL_1 TRG_LysEnd_GGAAcLL_2 |
| ELM Description: | Based on in vitro experiments (see references) this much more restricted pattern has been described for di-Leucine motifs interacting with the AP3 adaptor complex. It is found in a subset of proteins targeted to melanosomes, endosomes and lysosomes. |
| Pattern: | [DET]E[RK].PL[LI] |
| Pattern Probability: | 0.0000015 |
| Present in taxon: | Vertebrata |
| Interaction Domain: |
Clat_adaptor_s (PF01217)
Clathrin adaptor complex small chain
(Stochiometry: 1 : 1)
|
Lysosomes are acidic compartments within cells where lumenal hydrolases degrade endogenous and internalized macromolecules. Most soluble hydrolases transit by the Trans Golgi network (TGN) where they are sorted from secretory proteins before they are directed to the endosome and then the lysosomes. The sorting events at the TGN involve transmembrane receptors which are themselves bearing sorting determinants in their cytoplasmic tails. The interaction of such sorting signals with adaptor proteins such as APs and GGAs is responsible for the targeting of the receptors (and therefore their cargo). The acidic di Leu signals are interacting with the VHS domains of the GGAs adaptor proteins which in turn can bind to clathrin, ARF factor (regulator of coat assembly at the TGN) and other adaptors interacting with AP-1 gamma subunit. GGAs act by recruiting the receptors into TGN-derived clathrin-coated vesicles for transport to endosomes. The juxtamembrane di Leucine signals interact with AP1, AP2, AP3 and probably AP4 in trafficking events such as endocytosis, targeting to lysosomes or specialed compartments like melanosomes. |
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The residues Leu(Ile)475-Ile(Leu, Val, Ala)476, contained in the extended
carboxyl cytoplasmic tail, are critical for targeting of the resident
lysosomal membrane protein LIMP II to lysosomes.
Sandoval IV, Arredondo JJ, Alcalde J, Gonzalez Noriega A, Vandekerckhove J, Jimenez MA, Rico M
J Biol Chem 1994 Mar 4; 269 (9), 6622-31
PMID: 7509809
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A di-leucine-based motif in the cytoplasmic tail of LIMP-II and tyrosinase
mediates selective binding of AP-3.
Honing S, Sandoval IV, von Figura K
EMBO J 1998 Aug 10; 17 (5), 1304-14
PMID: 9482728
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The AP-3-dependent targeting of the melanosomal glycoprotein QNR-71
requires a di-leucine-based sorting signal.
Le Borgne R, Planque N, Martin P, Dewitte F, Saule S, Hoflack B
J Cell Sci 2001 Aug; 114, 2831-41
PMID: 11683416
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Structural requirements for interactions between leucine-sorting signals
and clathrin-associated adaptor protein complex AP3.
Rodionov DG, Honing S, Silye A, Kongsvik TL, von Figura K, Bakke O
J Biol Chem 2002 Dec 6; 277 (49), 47436-43
PMID: 12370188
(click table headers for sorting; Notes column: =Number of Switches, =Number of Interactions)
| Acc., Gene-, Name | Start | End | Subsequence | Logic | #Ev. | Organism | Notes |
|---|---|---|---|---|---|---|---|
| Q90372 QNR-71 QNR71_COTJA |
546 | 552 | FFFPKSTERNPLLKSKPGIV | TP | 6 | Coturnix japonica (Japanese quail) | |
| P11344 Tyr TYRO_MOUSE |
512 | 518 | KKKQPQEERQPLLMDKDDYH | TP | 2 | Mus musculus (House mouse) | |
| Q14108 SCARB2 SCRB2_HUMAN |
470 | 476 | KGQGSMDEGTADERAPLIRT | TP | 9 | Homo sapiens (Human) |
Please cite: ELM 2016-data update and new functionality of the eukaryotic linear motif resource. (PMID:26615199)
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
ELM data can be downloaded & distributed for non-commercial use according to the ELM Software License Agreement
