LIG_PIP2_ANTH_1
ELM server details
ELM
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Functional site class:
PI(4,5)P2 binding motifs
Functional site description:
Phosphatidylinositol-4,5-biphosphate binding motifs found in the N-terminus of ENTH containing proteins, responsible for binding to the lipid bilayer and subsequent events such as membrane curvature, cargo recruitment and targeting, vesicle budding...
ELM(s): LIG_PIP2_ANTH_1, LIG_PIP2_ENTH_1
LIG_PIP2_ANTH_1 description: The ANTH-type-PI(4,5)P2 binding motif is found in ENTH containing proteins of the AP180 family and actin binding proteins. It binds to the lipid bilayer and may serve to tether clathrin and cytoskeleton to the plasma membrane.
Pattern: [KG][AG][TID].{6}[PVLS]K.[KR][HY]
Present in taxon(s): Homo sapiens  Saccharomyces cerevisiae  Caenorhabditis elegans  Viridiplantae  Rattus norvegicus  Arabidopsis thaliana  Drosophila melanogaster  Loligo pealei  Fungi/Metazoa group  
Not represented in taxon(s):

o See instances for LIG_PIP2_ANTH_1


o Abstract

PIP2 binding sites are present is proteins with important roles in clathrin-mediated endocytosis such as epsins and AP180, namely cargo recruitment and membrane budding for vesicle formation. Binding to the membrane lipid bilayer allows correct targeting of these proteins and of the proteins they recruit (AP complexes for Epsins and Clahrin itself for AP180 ) to the plasma membrane. In the case of Epsin, the binding of lipid head groups directely induces curvature of the plasma membrane. Epsin and AP180 families are close relatives, both contain N-terminal lipid-binding domains and central clathrin/adaptor binding domains. However, they are distinct in that AP180 N-terminal homology (ANTH) domain binds lipids on its surface, while epsin-N-terminal homology (ENTH) domain binds lipids in a pocket. The functional class is represented by two ELMs corresponding to this two binding features.

o Selected references

Ford MG, Mills IG, Peter BJ, Vallis Y, Praefcke GJ, Evans PR, McMahon HT
Curvature of clathrin-coated pits driven by epsin.
Nature 2002 Sep 26;419(6905) : 361-6.
PMID: 12353027

Ford MG, Pearse BM, Higgins MK, Vallis Y, Owen DJ, Gibson A, Hopkins CR, Evans PR, McMahon HT
Simultaneous binding of PtdIns(4,5)P2 and clathrin by AP180 in the nucleation of clathrin lattices on membranes.
Science 2001 Feb 9;291(5506) : 1051-5.
PMID: 11161218

o This ELM has been assigned the following Gene Ontology (GO) terms for biological process, cellular component and molecular function.

Biological Process
  endocytosis
  receptor mediated endocytosis
Cellular Component
  cytosol
Molecular Function
  phosphatidylinositol-4,5-bisphosphate binding

 

o Instances for LIG_PIP2_ANTH_1

SequencePositionSubsequence
(Click for evidence information)
PDBGene NameProtein DescriptionOrganism
AP180_RAT 28-41 ARAVCKATTHEVMGPKKKHLDYLIQ - Name=Snap91; Clathrin coat assembly protein AP180 (Clathrin coat-associated protein AP180) (91 kDa synaptosomal-associated protein). Rattus norvegicus (Rat).
PICA_RAT 28-41 SKTVCKATTHEIMGPKKKHLDYLIQ 1HFA
Name=Picalm; Synonyms=Calm; Phosphatidylinositol-binding clathrin assembly protein (Clathrin assembly lymphoid myeloid leukemia protein) (rCALM). Rattus norvegicus (Rat).
PICA_DROME 30-43 AKSVCKATTEECIGPKKKHLDYLVH - Name=lap; ORFNames=CG2520; Phosphatidylinositol-binding clathrin assembly protein LAP (Like- AP180). Drosophila melanogaster (Fruit fly).
HIP1_HUMAN 39-52 TVSINKAINTQEVAVKEKHARTCIL - Name=HIP1; Huntingtin-interacting protein 1 (HIP-I). Homo sapiens (Human).
O94097_YARLI 16-29 NVNIKKATNTDESAPKRKHVRACIV - Name=SLA2; Synonyms=sla2; Sla2p (Putative Sla2 protein). Yarrowia lipolytica (Candida lipolytica).
SLAP2_CAEEL 21-34 LEAVQKAITKNEVPLKPKHARTIIV - ORFNames=ZK370.3; Protein SLA2 homolog. Caenorhabditis elegans.
AP2A1_HUMAN 45-58 IRSKFKGDKALDGYSKKKYVCKLLF - Name=AP2A1; Synonyms=ADTAA, CLAPA1; AP-2 complex subunit alpha-1 (Adapter-related protein complex 2 alpha- 1 subunit) (Alpha1-adaptin) (Alpha-adaptin A) (Adaptor protein complex AP-2 subunit alpha-1) (Clathrin assembly protein complex 2 alpha-A large chain) (100 kDa coated vesicle protein A) (Plasma membrane adaptor HA2/AP2 adaptin alpha A subunit). Homo sapiens (Human).
AP2A2_HUMAN 45-58 IRSKFKGDKALDGYSKKKYVCKLLF - Name=AP2A2; Synonyms=ADTAB, CLAPA2, KIAA0899; AP-2 complex subunit alpha-2 (Adapter-related protein complex 2 alpha- 2 subunit) (Alpha2-adaptin) (Alpha-adaptin C) (Adaptor protein complex AP-2 subunit alpha-2) (Clathrin assembly protein complex 2 alpha-C large chain) (100 kDa coated vesicle protein C) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit) (Huntingtin-interacting protein HYPJ). Homo sapiens (Human).
PICAL_HUMAN 28-41 SKTVCKATTHEIMGPKKKHLDYLIQ - Name=PICALM; Synonyms=CALM; Phosphatidylinositol-binding clathrin assembly protein (Clathrin assembly lymphoid myeloid leukemia protein). Homo sapiens (Human).
PICA_MOUSE 28-41 SKTVCKATTHEIMGPKKKHLDYLIQ - Name=Picalm; Synonyms=Calm, Fit1; Phosphatidylinositol-binding clathrin assembly protein (Clathrin assembly lymphoid myeloid leukemia) (CALM). Mus musculus (Mouse).